An intrinsic representation of atomic structure: From clusters to periodic systems

时间:2018-05-25作者:浏览量:279


标题

An intrinsic representation of atomic structure: From clusters to periodic systems

作者

作者:Li, XT (Li, Xiao-Tian)[1,2 ]; Xu, SG (Xu, Shao-Gang)[1,2 ]; Yang, XB (Yang, Xiao-Bao)[1,2,3 ]; Zhao, YJ (Zhao, Yu-Jun)[1,2,3 ]

期刊信息


JOURNAL OF CHEMICAL PHYSICS


卷:147

期:14

文献号:144106

DOI:10.1063/1.4997292

出版年:OCT 14 2017

文献类型:Article

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摘要

We have improved our distance matrix and eigen-subspace projection function (EPF) [X.-T. Li et al., J. Chem. Phys. 146, 154108 (2017)] to describe the atomic structure for periodic systems. Depicting the local structure of an atom, the EPF turns out to be invariant with respect to the choices of the unit cell and coordinate frame, leading to an intrinsic representation of the crystal with a set of EPFs of the nontrivial atoms. The difference of EPFs reveals the difference of atoms in local structure, while the accumulated difference between two sets of EPFs can be taken as the distance between configurations. Exemplified with the cases of carbon allotropes and boron sheets, our EPF approach shows exceptional rationality and efficiency to distinguish the atomic structures, which is crucial in structure recognition, comparison, and analysis. Published by AIP Publishing.

关键词

KeyWords Plus:CRYSTAL-STRUCTURE PREDICTION; 2-DIMENSIONAL BORON; NIGGLI REDUCTION; DISTANCE MATRIX; GLOBAL MINIMUM; SIMILARITY; GEOMETRY; CHEMISTRY; SEARCH

作者信息

作者信息

通讯作者地址:Zhao, YJ (通讯作者)

显示更多South China Univ Technol, Dept Phys, Guangzhou 510640, Guangdong, Peoples R China.
通讯作者地址:Zhao, YJ (通讯作者)
显示更多South China Univ Technol, Sch Mat Sci & Engn, Guangzhou 510640, Guangdong, Peoples R China.
通讯作者地址:Zhao, YJ (通讯作者)
显示更多South China Univ Technol, Key Lab Adv Energy Storage Mat Guangdong Prov, Guangzhou 510640, Guangdong, Peoples R China.


地址:

显示更多[ 1 ] South China Univ Technol, Dept Phys, Guangzhou 510640, Guangdong, Peoples R China
显示更多[ 2 ] South China Univ Technol, Sch Mat Sci & Engn, Guangzhou 510640, Guangdong, Peoples R China
显示更多[ 3 ] South China Univ Technol, Key Lab Adv Energy Storage Mat Guangdong Prov, Guangzhou 510640, Guangdong, Peoples R China


电子邮件地址:zhaoyj@scut.edu.cn

出版商

AMER INST PHYSICS, 1305 WALT WHITMAN RD, STE 300, MELVILLE, NY 11747-4501 USA

类别分类

类别 / 分类

研究方向:Chemistry; Physics

Web of Science 类别:Chemistry, Physical; Physics, Atomic, Molecular & Chemical